Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCCAGTCCCCTGGACACATTGAAGAGAGGAGCAAGTA
.(((.((((((((((((((((.&)))))))...................))))))))).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001303127
GeneSymbolDNAJC5G
Binding site959,999
Score0.923
Seed0
Au0.471
Energy-26.2
Binding len40
Me-7.912
Phylopstem0.768589
Phylopflank0.71207579375
Longest consecutive pairings9
Position of longest consecutive pairings5
Pairings in 3prime end7
Position3UTR
2D Structure