Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&AGCCAGCGACGGGAGCCGGA
..(((((((((..((((.(...&).))))....))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001303140
GeneSymbolPDZRN3
Binding site1734,1754
Score0.846
Seed1
Au0.309
Energy-22.3
Binding len20
Me-9.593
Phylopstem-0.25856566666666664
Phylopflank1.1165174569124998
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure