Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&AGCCAGCGACGGGAGCCGGA
..(((((((((..((((.(...&).))))....))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001303142
GeneSymbolPDZRN3
Binding site1961,1981
Score0.923
Seed1
Au0.309
Energy-22.3
Binding len20
Me-9.593
Phylopstem3.3256441111111115
Phylopflank2.9271895259875
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure