Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTACATGTTGTGCTGGGA
.(((((((((..(((((((...&)))))))..))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001303229
GeneSymbolPRUNE1
Binding site234,253
Score1.0
Seed1
Au0.471
Energy-21.3
Binding len19
Me-9.965
Phylopstem4.634782333333333
Phylopflank3.245911907500001
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure