Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTATTTTATTTGCCAGGG
.(((((((......(((((...&)))))......))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001303229
GeneSymbolPRUNE1
Binding site1582,1601
Score0.923
Seed1
Au0.559
Energy-18.2
Binding len19
Me-14.41
Phylopstem-0.09623627142857143
Phylopflank0.20443734999999996
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure