Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GGCTAGGAATTGAGCCAGG
..(((((((.(((((((.(...&).)))))))..))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001303251
GeneSymbolZBED8
Binding site2625,2644
Score1.0
Seed1
Au0.574
Energy-20.4
Binding len19
Me-6.2
Phylopstem-0.5097148571428571
Phylopflank0.06206941500000006
Longest consecutive pairings7
Position of longest consecutive pairings10
Pairings in 3prime end4
Position3UTR
2D Structure