Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GCATTGTGGATCAGGTT
((((((..((((((((......&))))))))..)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001303268
GeneSymbolPOLR2B
Binding site2643,2660
Score0.923
Seed0
Au0.574
Energy-16.2
Binding len17
Me-7.795
Phylopstem6.119441
Phylopflank5.887088506249999
Longest consecutive pairings8
Position of longest consecutive pairings9
Pairings in 3prime end2
PositionCDS
2D Structure