Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTTAACATTCATGTGTCAGGTA
((((((((((.(((((.(((..&))).)))))..)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001303413
GeneSymbolRPRD1A
Binding site1267,1289
Score0.846
Seed1
Au0.662
Energy-17.3
Binding len22
Me-6.762
Phylopstem5.0456023000000005
Phylopflank5.324350453375001
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure