Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCGCCGAGCGGGACTCGGAGGACGACGGAGAGGAGCCGGTGG
((((((((((((((((.((...&.))..)))))))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001303420
GeneSymbolCOLGALT2
Binding site459,501
Score0.846
Seed1
Au0.279
Energy-31.1
Binding len22
Me-3.938
Phylopstem0.11082305475
Phylopflank-0.32789808155
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure