Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TGTGCCTGGGATCATTGATGAGGAAAGCAGTGG
(((((..(((((((((((((.(&).))))))))).........))))...))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001303458
GeneSymbolIFT52
Binding site539,572
Score0.846
Seed0
Au0.5
Energy-18.8
Binding len33
Me-7.382
Phylopstem3.992797422727272
Phylopflank5.0496095325
Longest consecutive pairings9
Position of longest consecutive pairings22
Pairings in 3prime end7
PositionCDS
2D Structure