Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&AGCCAGGGACGCCACTTCAGGCAGCCTGTCAGAGGAGAGCAGTGC
(((((.(((((((.(((((...&.)))))..)))))))..))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001303479
GeneSymbolSHLD1
Binding site88,133
Score0.846
Seed0
Au0.426
Energy-19.9
Binding len23
Me-6.695
Phylopstem0.6603188714285714
Phylopflank0.354201518125
Longest consecutive pairings7
Position of longest consecutive pairings8
Pairings in 3prime end5
PositionCDS
2D Structure