Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TGCTTTGGAGGAGAGGACTATGGCAGCCAGG
..((((((((((((((((((..&)))))....))))))))........))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001303479
GeneSymbolSHLD1
Binding site64,95
Score0.923
Seed1
Au0.412
Energy-19.2
Binding len31
Me-4.957
Phylopstem0.42153285166666665
Phylopflank0.12279839250000002
Longest consecutive pairings8
Position of longest consecutive pairings14
Pairings in 3prime end6
Position5UTR
2D Structure