Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGGCCCTGGAGCCAGC
..((((((((..(((((((...&)))))))....)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001303494
GeneSymbolCBX6
Binding site4603,4623
Score0.846
Seed1
Au0.353
Energy-27.4
Binding len20
Me-11.129
Phylopstem-0.3532133
Phylopflank0.4218689449999999
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure