Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCTGGGAAGGGAGTTGGG
..(((((((((((((.(((...&))).))))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001303512
GeneSymbolPDZD4
Binding site3177,3195
Score0.923
Seed1
Au0.368
Energy-23.7
Binding len18
Me-5.19
Phylopstem3.1134593076923074
Phylopflank2.6036564395000004
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure