Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCTGGGAAGGGAGTTGGG
..(((((((((((((.(((...&))).))))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001303514
GeneSymbolPDZD4
Binding site2832,2850
Score0.923
Seed1
Au0.368
Energy-23.7
Binding len18
Me-5.19
Phylopstem2.9017868461538465
Phylopflank3.04201808625
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure