Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTGCCCAGGCTGGAGTGTAGTGG
((((((((((..(((((((((.&)))))))))..))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001303542
GeneSymbolRAB11FIP4
Binding site4315,4338
Score0.846
Seed1
Au0.515
Energy-26.8
Binding len23
Me-10.109
Phylopstem0.009385163636363637
Phylopflank-0.271636265
Longest consecutive pairings9
Position of longest consecutive pairings14
Pairings in 3prime end7
Position3UTR
2D Structure