Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCAACCCATGATTCATACCCAGCAAGGCCTAAGGACCAGTA
.(((((((((((.(((((((((&.)).))))))).)))).....)).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001303544
GeneSymbolVBP1
Binding site171,212
Score0.846
Seed1
Au0.471
Energy-22.9
Binding len30
Me-5.082
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings19
Pairings in 3prime end8
PositionCDS
2D Structure