Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGG
((((((((((..(((((((...&.)))))))..))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001303619
GeneSymbolCD226
Binding site7810,7861
Score0.846
Seed1
Au0.324
Energy-27.3
Binding len22
Me-10.109
Phylopstem0.15326536363636364
Phylopflank0.14025383000000002
Longest consecutive pairings7
Position of longest consecutive pairings14
Pairings in 3prime end5
Position3UTR
2D Structure