Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGTCCGGGAAGAGCTCAGCCTAGTGG
(((((((((((((((((((((.&)))))))))))).)...)))).)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001304284
GeneSymbolUSP6
Binding site480,507
Score1.0
Seed1
Au0.397
Energy-23.5
Binding len27
Me-3.938
Phylopstem-0.05061955384615387
Phylopflank-0.49838466625
Longest consecutive pairings12
Position of longest consecutive pairings15
Pairings in 3prime end7
Position5UTR
2D Structure