Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTAACCACCGCATATGCAT
.((((..((((((.((((((.&))))).).))))))..)))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047425348
GeneSymbolPRKCZ
Binding site1660,1681
Score0.846
Seed0
Au0.412
Energy-20.7
Binding len21
Me-8.095
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings6
Position of longest consecutive pairings7
Pairings in 3prime end6
Position3UTR
2D Structure