Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCCACTGTTGGCCATGTCGTAAGGCAGCAGCTGTGCCAGGA
.(((((((((...(((......&.)))..))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001304331
GeneSymbolPPFIA4
Binding site6163,6206
Score1.0
Seed1
Au0.441
Energy-17.9
Binding len16
Me-11.254
Phylopstem0.10536834444444444
Phylopflank0.06284264499999999
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure