Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCCAGTGACTTAAGAAAGCATAGGAGGAAGCTGCTGTCGCCAGTGT
(((((((((((((((((((((.&)))))))).................))))))..........))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001304331
GeneSymbolPPFIA4
Binding site2605,2654
Score1.0
Seed1
Au0.485
Energy-27.4
Binding len49
Me-3.938
Phylopstem2.853617291666667
Phylopflank4.16031905
Longest consecutive pairings8
Position of longest consecutive pairings41
Pairings in 3prime end7
PositionCDS
2D Structure