Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCACAGAGGAGGCGGG
..(((.((((..(((((((((.&))))).)))))))).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001304339
GeneSymbolKDM4C
Binding site3713,3732
Score0.846
Seed0
Au0.368
Energy-23.9
Binding len19
Me-13.03
Phylopstem0.37928433
Phylopflank0.3928381739999998
Longest consecutive pairings8
Position of longest consecutive pairings5
Pairings in 3prime end7
Position3UTR
2D Structure