Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTTCCCAGAGAAGAAGATGGACTGAAAGCTGCCAGTT
.(((((((((((((((((.(((&))).)))))))).......))).........)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001304421
GeneSymbolSLMAP
Binding site121,159
Score0.923
Seed1
Au0.5
Energy-22.3
Binding len38
Me-3.793
Phylopstem1.9633987818181824
Phylopflank1.3778171650000002
Longest consecutive pairings8
Position of longest consecutive pairings26
Pairings in 3prime end7
Position5UTR
2D Structure