Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCCCTCCTTTACCTCCCAGCCTCTTGCAGAGGAGCCCAGTGA
((((((((((((((((((.((.&.)))))))........))))))))).)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001304476
GeneSymbolSTXBP6
Binding site3357,3402
Score0.846
Seed1
Au0.485
Energy-28.0
Binding len31
Me-3.938
Phylopstem4.702393888888888
Phylopflank4.6929973675
Longest consecutive pairings9
Position of longest consecutive pairings6
Pairings in 3prime end6
Position3UTR
2D Structure