Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCCTTGACTGCCTAGAGGGCTCAACTCCAGGGCTTTGAGGCCAGTGA
(((((((((((((((((((((.&.)))))))))))).................))).)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001304509
GeneSymbolHDHD3
Binding site1263,1313
Score0.846
Seed1
Au0.368
Energy-28.2
Binding len41
Me-3.938
Phylopstem-0.3608780307692307
Phylopflank-0.02113778
Longest consecutive pairings12
Position of longest consecutive pairings28
Pairings in 3prime end7
PositionCDS
2D Structure