Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCTTCCTTGTGAGTCAGGTGGGTCCTGGGCCCAGGAACCGGCCCGGAGCCGTGG
(((.(((((((((((((((...&.))))))))).......))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001304509
GeneSymbolHDHD3
Binding site41,98
Score0.846
Seed0
Au0.294
Energy-27.1
Binding len27
Me-6.97
Phylopstem-0.24947359090909094
Phylopflank-0.1432777346875
Longest consecutive pairings9
Position of longest consecutive pairings17
Pairings in 3prime end5
Position5UTR
2D Structure