Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGACAGGGTGTGTGGCATTGTGTTCTATGCCAGAGTG
((((((((((((((((......&.))))))).....))))))).)).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001304536
GeneSymbolEPHA4
Binding site5620,5659
Score1.0
Seed1
Au0.515
Energy-18.4
Binding len24
Me-3.938
Phylopstem5.734889272727273
Phylopflank5.392142508749999
Longest consecutive pairings7
Position of longest consecutive pairings16
Pairings in 3prime end2
Position3UTR
2D Structure