Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAATCCTACAGATACTGCCAGGA
.(((((((.....(((((((((&))))).)))).....))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001304799
GeneSymbolCIAO3
Binding site483,506
Score0.846
Seed1
Au0.603
Energy-19.5
Binding len23
Me-13.553
Phylopstem-0.23195716999999996
Phylopflank-0.7763898112500001
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure