Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAATTCTGAGTGAGCTGCAGGGTGTGCTGGGA
.((((((((((..(((((.(((&.))))))))..)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001304799
GeneSymbolCIAO3
Binding site1609,1641
Score0.846
Seed1
Au0.412
Energy-22.5
Binding len22
Me-8.429
Phylopstem3.2410755
Phylopflank3.3382792525
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure