Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TGTGCCCAGAAGGCTGGCCTGTACATGAAAATGGAGCCCGTGA
(((.((((((((((((((((.(&).))))))))))....................)))))).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001304808
GeneSymbolBRD1
Binding site1450,1493
Score1.0
Seed0
Au0.412
Energy-27.5
Binding len43
Me-6.97
Phylopstem3.473717586111112
Phylopflank3.528581223749999
Longest consecutive pairings10
Position of longest consecutive pairings31
Pairings in 3prime end7
PositionCDS
2D Structure