Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TGTGCCCAGAAGGCTGGCCTGTACATGAAAATGGAGCCCGTGA
(((.((((((((((((((((.(&).))))))))))....................)))))).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001304809
GeneSymbolBRD1
Binding site1244,1287
Score0.923
Seed0
Au0.412
Energy-27.5
Binding len43
Me-6.97
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings31
Pairings in 3prime end7
PositionCDS
2D Structure