Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGGAAGGCTCGGAGGTGGGCCGGTGA
(((((((((.(((((((((...&.))))))))).))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001304944
GeneSymbolDNAJC22
Binding site483,510
Score0.923
Seed1
Au0.338
Energy-27.6
Binding len21
Me-5.18
Phylopstem0.29987817777777775
Phylopflank-0.15284374000000003
Longest consecutive pairings9
Position of longest consecutive pairings11
Pairings in 3prime end5
Position5UTR
2D Structure