Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GCATTTCTGCCAGGA
.(((((((...(((((......&)))))..))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001304993
GeneSymbolSDSL
Binding site277,292
Score0.923
Seed1
Au0.441
Energy-16.1
Binding len15
Me-8.917
Phylopstem4.341684
Phylopflank3.6447589073750004
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure