Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTGCCCAGGCTGGAGTGCAGTGG
((((((((((..(((((((((.&)))))))))..))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001304996
GeneSymbolTMEM170A
Binding site1857,1880
Score0.923
Seed1
Au0.397
Energy-28.9
Binding len23
Me-10.109
Phylopstem0.2839677454545455
Phylopflank0.17850181000000004
Longest consecutive pairings9
Position of longest consecutive pairings14
Pairings in 3prime end7
Position3UTR
2D Structure