Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTGCCCAGGCTGGAGTGCAGTGG
((((((((((..(((((((((.&)))))))))..))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001304998
GeneSymbolTMEM170A
Binding site1701,1724
Score0.846
Seed1
Au0.397
Energy-28.9
Binding len23
Me-10.109
Phylopstem-0.28091401818181816
Phylopflank0.42493149750000014
Longest consecutive pairings9
Position of longest consecutive pairings14
Pairings in 3prime end7
Position3UTR
2D Structure