Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTTGCTCTGTCGCCCAGGCTGGAGTGCAGTGG
((((((((((..(((((((...&.)))))))..))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001304998
GeneSymbolTMEM170A
Binding site3410,3443
Score0.846
Seed1
Au0.382
Energy-27.3
Binding len22
Me-10.109
Phylopstem0.4600495454545454
Phylopflank0.11377336499999996
Longest consecutive pairings7
Position of longest consecutive pairings14
Pairings in 3prime end5
Position3UTR
2D Structure