Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCTGGGAGGGTGGCAGG
..(((.(.(((((((((((...&))))))))))).).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001305
GeneSymbolCLDN4
Binding site1531,1549
Score0.923
Seed0
Au0.397
Energy-22.8
Binding len18
Me-9.172
Phylopstem0.19994636363636362
Phylopflank-0.125459705
Longest consecutive pairings11
Position of longest consecutive pairings7
Pairings in 3prime end5
Position3UTR
2D Structure