Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTATGGGTAGCCAGGTG
(((((((.(((..(((((....&))))).)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001305545
GeneSymbolRNF43
Binding site2497,2514
Score1.0
Seed1
Au0.485
Energy-18.0
Binding len17
Me-10.887
Phylopstem2.8899817142857143
Phylopflank1.66057317
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure