Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGGGTTGGTTTGCTGGGG
.(((((((..((((.(((....&))).))))...))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001305564
GeneSymbolTXNL4A
Binding site659,678
Score0.846
Seed1
Au0.397
Energy-17.7
Binding len19
Me-6.828
Phylopstem-0.5331888142857142
Phylopflank-0.07107004
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure