Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCTTGGACAACAATCAGCTGGGGGACGACCTTGTGTTGCCAGGG
.((((((((((((.((......&.)).)))))).)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001305581
GeneSymbolLRMDA
Binding site275,320
Score0.846
Seed1
Au0.471
Energy-19.2
Binding len18
Me-4.65
Phylopstem6.3165432307692315
Phylopflank4.708136112500001
Longest consecutive pairings6
Position of longest consecutive pairings8
Pairings in 3prime end2
PositionCDS
2D Structure