Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTACATGACCCACCACATCCCACCCAGAGAGGCCGCCACACTGCCGGTGG
(((((((.(((((((((((...&.)))))))))))..........))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001347684
GeneSymbolUPK3B
Binding site838,888
Score0.846
Seed1
Au0.279
Energy-29.1
Binding len30
Me-6.251
Phylopstem0.8833658181818183
Phylopflank0.5255326500000002
Longest consecutive pairings11
Position of longest consecutive pairings18
Pairings in 3prime end5
PositionCDS
2D Structure