Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGGGATTAGCTTTAGGAACAACCATAGCTGTT
..(((((((.(((((((((((&)))))................)))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047425654
GeneSymbolZDHHC6
Binding site1048,1084
Score0.846
Seed1
Au0.632
Energy-21.2
Binding len36
Me-6.2
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure