Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTCTACATAACTGGTTTTCCACAGGCATCTTCAGTTATTGCTTGTCAGGTG
((((((((..((((((((((..&))))))))..............................))..)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001306075
GeneSymbolSLBP
Binding site1119,1170
Score0.846
Seed1
Au0.588
Energy-18.3
Binding len51
Me-6.236
Phylopstem5.362162950000001
Phylopflank4.2859203075000005
Longest consecutive pairings8
Position of longest consecutive pairings43
Pairings in 3prime end6
Position3UTR
2D Structure