Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGGGAGCTCAGGAAGGAAGGAGAGCCCAGAAGCAGGGACAGGGAGCTGGTT
.((((((((((((((((((...&.)))))))).........)))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001306094
GeneSymbolNPIPB15
Binding site970,1022
Score0.923
Seed1
Au0.382
Energy-26.7
Binding len29
Me-3.793
Phylopstem-0.4887078518518519
Phylopflank-0.10379519749999998
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure