Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTGGGAGGCACGCTGGACGCTGAGAGGGA
...((((.(((((((((((((&)))))))))..........))))..)))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001306133
GeneSymbolJAKMIP1
Binding site1799,1829
Score0.846
Seed0
Au0.309
Energy-25.8
Binding len30
Me-8.828
Phylopstem3.6071012086956515
Phylopflank3.3320856062499997
Longest consecutive pairings9
Position of longest consecutive pairings21
Pairings in 3prime end8
PositionCDS
2D Structure