Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GATCTTGTCTTTTAGGATTAGGCCCAGGGACCATTTGTGTGGCTAGGTG
(((((((((((((.........&.))))))).)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001306144
GeneSymbolMTMR1
Binding site2240,2289
Score0.846
Seed1
Au0.456
Energy-16.4
Binding len16
Me-5.763
Phylopstem-0.2460396285714286
Phylopflank-0.06398598250000001
Longest consecutive pairings7
Position of longest consecutive pairings8
Pairings in 3prime end0
Position3UTR
2D Structure