Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GGCCAGGAAGATCATCAAGCAGCCTCAGCGTGTGGGAGCCGGTC
.((((((((((..((((((...&.))).))).....)))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001306146
GeneSymbolHDC
Binding site1557,1601
Score0.827
Seed1
Au0.456
Energy-24.3
Binding len24
Me-8.429
Phylopstem4.4273993
Phylopflank4.513222526750001
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure