Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ATCCAGATGGGTTCAGCAGTCTGGTCAGTGA
(((((((((((.(((((((...&))))))).)))...........)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001306146
GeneSymbolHDC
Binding site2182,2213
Score0.923
Seed1
Au0.426
Energy-22.9
Binding len31
Me-7.284
Phylopstem0.8613679363636364
Phylopflank1.8900915074999995
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure