Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CCGGAAATGGGTCCTACCATCTTCTCGGAGCCGGA
..((((((((......(((((.&.)))))........)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001306153
GeneSymbolCCT5
Binding site14,49
Score0.923
Seed1
Au0.559
Energy-22.1
Binding len23
Me-14.243
Phylopstem1.4828417374999998
Phylopflank-0.7823220813888888
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure